Exploring Biomolecular Literature with EVEX: Connecting Genes through Events, Homology, and Indirect Associations
Identifieur interne : 000760 ( Main/Exploration ); précédent : 000759; suivant : 000761Exploring Biomolecular Literature with EVEX: Connecting Genes through Events, Homology, and Indirect Associations
Auteurs : Sofie Van Landeghem [Belgique] ; Kai Hakala [Finlande] ; Samuel Rönnqvist [Finlande] ; Tapio Salakoski [Finlande] ; Yves Van De Peer [Belgique] ; Filip Ginter [Finlande]Source :
- Advances in Bioinformatics [ 1687-8027 ] ; 2012.
Abstract
Technological advancements in the field of genetics have led not only to an abundance of experimental data, but also caused an exponential increase of the number of published biomolecular studies. Text mining is widely accepted as a promising technique to help researchers in the life sciences deal with the amount of available literature. This paper presents a freely available web application built on top of 21.3 million detailed biomolecular events extracted from all PubMed abstracts. These text mining results were generated by a state-of-the-art event extraction system and enriched with gene family associations and abstract generalizations, accounting for lexical variants and synonymy. The EVEX resource locates relevant literature on phosphorylation, regulation targets, binding partners, and several other biomolecular events and assigns confidence values to these events. The search function accepts official gene/protein symbols as well as common names from all species. Finally, the web application is a powerful tool for generating homology-based hypotheses as well as novel, indirect associations between genes and proteins such as coregulators.
Url:
DOI: 10.1155/2012/582765
PubMed: 22719757
PubMed Central: 3375141
Affiliations:
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Le document en format XML
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9052 Gent</wicri:regionArea><wicri:noRegion>9052 Gent</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I2">Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 927, 9052 Gent, Belgium</nlm:aff><country xml:lang="fr">Belgique</country><wicri:regionArea>Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 927, 9052 Gent</wicri:regionArea><wicri:noRegion>9052 Gent</wicri:noRegion></affiliation></author><author><name sortKey="Ginter, Filip" sort="Ginter, Filip" uniqKey="Ginter F" first="Filip" last="Ginter">Filip Ginter</name><affiliation wicri:level="4"><nlm:aff id="I3">Department of Information Technology, University of Turku, Joukahaisenkatu 3-5, 20520 Turku, Finland</nlm:aff><country xml:lang="fr">Finlande</country><wicri:regionArea>Department of Information Technology, University of Turku, Joukahaisenkatu 3-5, 20520 Turku</wicri:regionArea><placeName><settlement type="city">Turku</settlement><region type="région" nuts="2">Finlande occidentale</region></placeName><orgName type="university">Université de Turku</orgName><placeName><settlement type="city">Turku</settlement><region type="région" nuts="2">Finlande occidentale</region></placeName></affiliation></author></analytic><series><title level="j">Advances in Bioinformatics</title><idno type="ISSN">1687-8027</idno><idno type="eISSN">1687-8035</idno><imprint><date when="2012">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Technological advancements in the field of genetics have led not only to an abundance of experimental data, but also caused an exponential increase of the number of published biomolecular studies. Text mining is widely accepted as a promising technique to help researchers in the life sciences deal with the amount of available literature. This paper presents a freely available web application built on top of 21.3 million detailed biomolecular events extracted from all PubMed abstracts. These text mining results were generated by a state-of-the-art event extraction system and enriched with gene family associations and abstract generalizations, accounting for lexical variants and synonymy. The EVEX resource locates relevant literature on phosphorylation, regulation targets, binding partners, and several other biomolecular events and assigns confidence values to these events. The search function accepts official gene/protein symbols as well as common names from all species. Finally, the web application is a powerful tool for generating homology-based hypotheses as well as novel, indirect associations between genes and proteins such as coregulators.
</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Kim, J D" uniqKey="Kim J">J-D Kim</name></author><author><name sortKey="Ohta, T" uniqKey="Ohta T">T Ohta</name></author><author><name sortKey="Pyysalo, S" uniqKey="Pyysalo S">S Pyysalo</name></author><author><name sortKey="Kano, Y" uniqKey="Kano Y">Y Kano</name></author><author><name sortKey="Tsujii, J" uniqKey="Tsujii J">J Tsujii</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kim, J D" uniqKey="Kim J">J-D Kim</name></author><author><name sortKey="Pyysalo, S" uniqKey="Pyysalo S">S Pyysalo</name></author><author><name sortKey="Ohta, T" uniqKey="Ohta T">T Ohta</name></author><author><name sortKey="Bossy N Nguyen, R" uniqKey="Bossy N Nguyen R">R Bossy, N. Nguyen</name></author><author><name sortKey="Nguyen, N" uniqKey="Nguyen N">N Nguyen</name></author><author><name sortKey="Tsujii, J" uniqKey="Tsujii J">J Tsujii</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Homann, R" uniqKey="Homann R">R Homann</name></author><author><name sortKey="Valencia, A" uniqKey="Valencia A">A Valencia</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ohta, T" uniqKey="Ohta T">T Ohta</name></author><author><name sortKey="Miyao, Y" uniqKey="Miyao Y">Y Miyao</name></author><author><name sortKey="Ninomiya, T" uniqKey="Ninomiya T">T Ninomiya</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rebholz Schuhmann, D" uniqKey="Rebholz Schuhmann D">D Rebholz-Schuhmann</name></author><author><name sortKey="Kirsch, H" uniqKey="Kirsch H">H Kirsch</name></author><author><name sortKey="Arregui, M" uniqKey="Arregui M">M Arregui</name></author><author><name sortKey="Gaudan, S" uniqKey="Gaudan S">S Gaudan</name></author><author><name sortKey="Riethoven, M" uniqKey="Riethoven M">M Riethoven</name></author><author><name sortKey="Stoehr, P" uniqKey="Stoehr P">P Stoehr</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hearst, Ma" uniqKey="Hearst M">MA Hearst</name></author><author><name sortKey="Divoli, A" uniqKey="Divoli A">A Divoli</name></author><author><name sortKey="Guturu, Hh" uniqKey="Guturu H">HH Guturu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Xu, S" uniqKey="Xu S">S Xu</name></author><author><name sortKey="Mccusker, J" uniqKey="Mccusker J">J McCusker</name></author><author><name sortKey="Krauthammer, M" uniqKey="Krauthammer M">M Krauthammer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Agarwal, S" uniqKey="Agarwal S">S Agarwal</name></author><author><name sortKey="Yu, H" uniqKey="Yu H">H Yu</name></author><author><name sortKey="Kohane, I" uniqKey="Kohane I">I Kohane</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bjorne, J" uniqKey="Bjorne J">J Björne</name></author><author><name sortKey="Ginter, F" uniqKey="Ginter F">F Ginter</name></author><author><name sortKey="Pyysalo, S" uniqKey="Pyysalo S">S Pyysalo</name></author><author><name sortKey="Tsujii, J" uniqKey="Tsujii J">J Tsujii</name></author><author><name sortKey="Salakoski, T" uniqKey="Salakoski T">T Salakoski</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Van Landeghem, S" uniqKey="Van Landeghem S">S Van Landeghem</name></author><author><name sortKey="Ginter, F" uniqKey="Ginter F">F Ginter</name></author><author><name sortKey="Van De Peer, Y" uniqKey="Van De Peer Y">Y Van de Peer</name></author><author><name sortKey="Salakoski, T" uniqKey="Salakoski T">T Salakoski</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Leaman, R" uniqKey="Leaman R">R Leaman</name></author><author><name sortKey="Gonzalez, G" uniqKey="Gonzalez G">G Gonzalez</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bjorne, J" uniqKey="Bjorne J">J Björne</name></author><author><name sortKey="Ginter, F" uniqKey="Ginter F">F Ginter</name></author><author><name sortKey="Salakoski, T" uniqKey="Salakoski T">T Salakoski</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Sayers, Ew" uniqKey="Sayers E">EW Sayers</name></author><author><name sortKey="Barrett, T" uniqKey="Barrett T">T Barrett</name></author><author><name sortKey="Benson, Da" uniqKey="Benson D">DA Benson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Flicek, P" uniqKey="Flicek P">P Flicek</name></author><author><name sortKey="Amode, Mr" uniqKey="Amode M">MR Amode</name></author><author><name sortKey="Barrell, D" uniqKey="Barrell D">D Barrell</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kersey, Pj" uniqKey="Kersey P">PJ Kersey</name></author><author><name sortKey="Lawson, D" uniqKey="Lawson D">D Lawson</name></author><author><name sortKey="Birney, E" uniqKey="Birney E">E Birney</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Crammer, K" uniqKey="Crammer K">K Crammer</name></author><author><name sortKey="Singer, Y" uniqKey="Singer Y">Y Singer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Segal, E" uniqKey="Segal E">E Segal</name></author><author><name sortKey="Shapira, M" uniqKey="Shapira M">M Shapira</name></author><author><name sortKey="Regev, A" uniqKey="Regev A">A Regev</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bjorne, J" uniqKey="Bjorne J">J Björne</name></author><author><name sortKey="Ginter, F" uniqKey="Ginter F">F Ginter</name></author><author><name sortKey="Pyysalo, S" uniqKey="Pyysalo S">S Pyysalo</name></author><author><name sortKey="Tsujii, J" uniqKey="Tsujii J">J Tsujii</name></author><author><name sortKey="Salakoski, T" uniqKey="Salakoski T">T Salakoski</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kaewphan, S" uniqKey="Kaewphan S">S Kaewphan</name></author><author><name sortKey="Kreula, S" uniqKey="Kreula S">S Kreula</name></author><author><name sortKey="Van Landeghem, S" uniqKey="Van Landeghem S">S Van Landeghem</name></author><author><name sortKey="Van De Peer, Y" uniqKey="Van De Peer Y">Y Van de Peer</name></author><author><name sortKey="Jones, P" uniqKey="Jones P">P Jones</name></author><author><name sortKey="Ginter, F" uniqKey="Ginter F">F Ginter</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ohta, T" uniqKey="Ohta T">T Ohta</name></author><author><name sortKey="Pyysalo, S" uniqKey="Pyysalo S">S Pyysalo</name></author><author><name sortKey="Tsujii, J" uniqKey="Tsujii J">J Tsujii</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Carballo, Ja" uniqKey="Carballo J">JA Carballo</name></author><author><name sortKey="Cha, Rs" uniqKey="Cha R">RS Cha</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Loewenstein, Y" uniqKey="Loewenstein Y">Y Loewenstein</name></author><author><name sortKey="Raimondo, D" uniqKey="Raimondo D">D Raimondo</name></author><author><name sortKey="Redfern, Oc" uniqKey="Redfern O">OC Redfern</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Proost, S" uniqKey="Proost S">S Proost</name></author><author><name sortKey="Van Bel, M" uniqKey="Van Bel M">M Van Bel</name></author><author><name sortKey="Sterck, L" uniqKey="Sterck L">L Sterck</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kato, R" uniqKey="Kato R">R Kato</name></author><author><name sortKey="Ogawa, H" uniqKey="Ogawa H">H Ogawa</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Stenetorp, P" uniqKey="Stenetorp P">P Stenetorp</name></author><author><name sortKey="Topi, G" uniqKey="Topi G">G Topić</name></author><author><name sortKey="Pyysalo, S" uniqKey="Pyysalo S">S Pyysalo</name></author><author><name sortKey="Ohta, T" uniqKey="Ohta T">T Ohta</name></author><author><name sortKey="Kim, J D" uniqKey="Kim J">J-D Kim</name></author><author><name sortKey="Tsujii, J" uniqKey="Tsujii J">J Tsujii</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bjorne, J" uniqKey="Bjorne J">J Björne</name></author><author><name sortKey="Salakoski, T" uniqKey="Salakoski T">T Salakoski</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pyysalo, S" uniqKey="Pyysalo S">S Pyysalo</name></author><author><name sortKey="Ohta, T" uniqKey="Ohta T">T Ohta</name></author><author><name sortKey="Tsujii, J" uniqKey="Tsujii J">J Tsujii</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Van Landeghem, S" uniqKey="Van Landeghem S">S Van Landeghem</name></author><author><name sortKey="Bjorne, J" uniqKey="Bjorne J">J Björne</name></author><author><name sortKey="Abeel, T" uniqKey="Abeel T">T Abeel</name></author><author><name sortKey="De Baets, B" uniqKey="De Baets B">B De Baets</name></author><author><name sortKey="Salakoski, T" uniqKey="Salakoski T">T Salakoski</name></author><author><name sortKey="Van De Peer, Y" uniqKey="Van De Peer Y">Y Van de Peer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lu, Z" uniqKey="Lu Z">Z Lu</name></author><author><name sortKey="Kao, Hy" uniqKey="Kao H">HY Kao</name></author><author><name sortKey="Wei, Ch" uniqKey="Wei C">CH Wei</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Belgique</li><li>Finlande</li></country><region><li>Finlande occidentale</li></region><settlement><li>Turku</li></settlement><orgName><li>Université de Turku</li></orgName></list><tree><country name="Belgique"><noRegion><name sortKey="Van Landeghem, Sofie" sort="Van Landeghem, Sofie" uniqKey="Van Landeghem S" first="Sofie" last="Van Landeghem">Sofie Van Landeghem</name></noRegion><name sortKey="Van De Peer, Yves" sort="Van De Peer, Yves" uniqKey="Van De Peer Y" first="Yves" last="Van De Peer">Yves Van De Peer</name><name sortKey="Van De Peer, Yves" sort="Van De Peer, Yves" uniqKey="Van De Peer Y" first="Yves" last="Van De Peer">Yves Van De Peer</name><name sortKey="Van Landeghem, Sofie" sort="Van Landeghem, Sofie" uniqKey="Van Landeghem S" first="Sofie" last="Van Landeghem">Sofie Van Landeghem</name></country><country name="Finlande"><region name="Finlande occidentale"><name sortKey="Hakala, Kai" sort="Hakala, Kai" uniqKey="Hakala K" first="Kai" last="Hakala">Kai Hakala</name></region><name sortKey="Ginter, Filip" sort="Ginter, Filip" uniqKey="Ginter F" first="Filip" last="Ginter">Filip Ginter</name><name sortKey="Ronnqvist, Samuel" sort="Ronnqvist, Samuel" uniqKey="Ronnqvist S" first="Samuel" last="Rönnqvist">Samuel Rönnqvist</name><name sortKey="Salakoski, Tapio" sort="Salakoski, Tapio" uniqKey="Salakoski T" first="Tapio" last="Salakoski">Tapio Salakoski</name><name sortKey="Salakoski, Tapio" sort="Salakoski, Tapio" uniqKey="Salakoski T" first="Tapio" last="Salakoski">Tapio Salakoski</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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